Water DNA Sequencing

Whether you're seeking to optimize wastewater treatment, monitor for harmful algal blooms, or assess the impact of human activities on aquatic ecosystems, our comprehensive water DNA sequencing services can provide the insights you need to drive success. Trust the expertise of CD BioSciences to unlock the secrets of your water microbiome and pave the way for a more sustainable future.

Introduction to Water DNA Sequencing

Water is the lifeblood of our planet, sustaining countless ecosystems and supporting human health and industry. However, the microbial communities that reside within water systems can have a profound impact on water quality, posing both opportunities and challenges. That's where water DNA sequencing comes into play.

Water DNA sequencing is a powerful tool that allows us to delve deep into the complex world of aquatic microbiomes. By analyzing the genetic material extracted from water samples, we can gain unprecedented insights into the taxonomic composition, functional capabilities, and dynamic interactions of the microbial communities that call these environments home.

A case study of next-generation sequencing workflow design.Fig. 1 An example of next-generation sequencing workflow design. (Vierheilig J., et al., 2015)

Methods of Water DNA Sequencing

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16S rDNA Amplicon Sequencin

This targeted approach focuses on the analysis of a specific gene, the 16S ribosomal RNA (rRNA) gene, which is ubiquitous among bacteria and archaea. By amplifying and sequencing this gene, we can obtain a comprehensive taxonomic profile of the microbial community, identifying the dominant and rare species present.

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Whole-Metagenome Sequencing (WMS)

In contrast, WMS provides a more holistic view of the water microbiome. By sequencing the entire genetic content of a sample, we can uncover not only the taxonomic composition but also the functional potential of the community. This approach allows us to identify metabolic pathways, detect the presence of antibiotic resistance genes, and even discover novel microorganisms.

Our Services

At the heart of CD BioSciences' water DNA sequencing services is our state-of-the-art technology. We utilize the latest advancements in high-throughput sequencing platforms, ensuring that we can generate vast amounts of high-quality genetic data from your water samples.

  • Next-Generation Sequencing (NGS)
    Our laboratory is equipped with cutting-edge NGS instruments, such as Illumina and Ion Torrent systems, which can produce millions of DNA sequence reads in a single run. This massively parallel approach allows us to capture the full diversity of your water microbiome, even detecting rare and low-abundance species.
  • Bioinformatics Expertise
    To make sense of the vast amounts of data generated by our NGS platforms, CD BioSciences employs a team of highly skilled bioinformaticians. Using powerful computational tools and custom algorithms, they meticulously analyze the sequencing data, identifying taxonomic classifications, functional annotations, and novel insights.

With our comprehensive water DNA sequencing services, CD BioSciences can help you unlock a wealth of information about the microorganisms present in your water systems. Some of the key target substances we can detect and analyze include:

Bacteria and Archaea

Our 16S rDNA amplicon sequencing and whole-metagenome sequencing approaches allow us to identify a wide range of bacterial and archaeal species, providing insights into the taxonomic composition and potential metabolic activities of these microorganisms.

Antibiotic Resistance Genes

By analyzing the functional potential of the water microbiome, we can detect the presence of genes associated with antibiotic resistance, enabling you to develop strategies to mitigate the spread of these critical threats.

Pathogens and Indicator Organisms

Our DNA sequencing services can also identify the presence of known waterborne pathogens, as well as indicator organisms that can signal the potential for contamination, allowing you to proactively address public health concerns.

Novel Microorganisms

Through our whole-metagenome sequencing approach, CD BioSciences has the capability to discover previously unknown microorganisms, which may hold the key to unlocking new opportunities in water treatment, bioremediation, or even biotechnology.

Why Choose Us?

At CD BioSciences, we are committed to supporting our clients in their quest for sustainable water management. By harnessing the power of water DNA sequencing, we empower water utilities, environmental agencies, and research institutions to make informed decisions, address emerging challenges, and unlock new opportunities. If you are interested in our services, please contact us for more information.

Reference

  1. Vierheilig Julia, et al. "Potential applications of next generation DNA sequencing of 16S rRNA gene amplicons in microbial water quality monitoring." Water Science and Technology 72.11 (2015): 1962-1972.

Our products and services are for research use only and cannot be used for any clinical purposes.

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